Overview

This compendium contains all the material used to generate the final report. It is automatically generated thanks to Bookdown and Rstudio. (I swear, it only took a few hours to convert my source code into this.)

All items presented were developed independently by myself for my half of the project. Separate are the data (supplied by Contact) and presentation (joint with Vida Fox, but hosted in my GitHub).

Compilation requires data in (root)/wairakei_data/*.xlsx, i.e., you won’t be able to run any of the code but it’s been pre-run for you. Raw data is confidential - contact Contact for access. The config file /wairakei_data/config.xlsx also may contain confidential data and is not committed, as is the entire /wairakei_data/ folder.

Components

  • 1 Motivation Basically an exec summary. Used as the draft for my Wordpress page.
  • 2 Research Journal Meeting notes and emails.
  • 3 Initial Plots Recreation of the provided Excel worksheet.
  • 4 Python Extraction Code Exploratory analysis and process data to a config and data spreadsheet.
  • 5 R, JAGS, and RJAGS Takes the data from the config/data sheets and format into JAGS input. Then post-processes the output. This is the program used to create the report outputs.
  • Special Thanks Just a few of the people who made this possible.
  • Wordpress Page Requires a “subscription” to the ENGSCI700 2018 blogs to view.
  • Presentation Slides Powerpoint from our joint oral presentation.
  • Git Logs Version history on my GitHub.

Non-components

(Not included)

  • Data So that this compendium can be uploaded to Github without paying for a private repo.
    • 2486 rows of mass flow / whp data from multiple sources.
    • 420 rows of time-series mass flow data from PI.
    • 74.5 MB of spreadsheets from Contact that have crashed my computer many times.
  • Raw Outputs
    • 456 MB of output traces – 10,000 samples of 5654 variables.
    • Blood, sweat and tears, which do not aid the communication of my work.